{
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  "Package": "skewlmm",
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  "Title": "Scale Mixture of Skew-Normal Linear Mixed Models",
  "Version": "1.1.3",
  "Authors@R": "c(person(\"Fernanda L.\", \"Schumacher\", role = c(\"aut\", \"cre\"),\nemail = \"fernandalschumacher@gmail.com\",\ncomment = c(ORCID = \"0000-0002-5724-8918\")),\nperson(\"Larissa A.\", \"Matos\", role = \"aut\",\ncomment = c(ORCID = \"0000-0002-2635-0901\")),\nperson(\"Victor H.\", \"Lachos\", role = \"aut\",\ncomment = c(ORCID = \"0000-0002-7239-2459\")),\nperson(\"Katherine A.\", \"L. Valeriano\", role = \"aut\",\ncomment = c(ORCID = \"0000-0001-6388-4753\")),\nperson(\"Nicholas\", \"Henderson\", role = \"ctb\"),\nperson(\"Ravi\", \"Varadhan\", role = \"ctb\"))",
  "Maintainer": "Fernanda L. Schumacher <fernandalschumacher@gmail.com>",
  "Description": "It fits scale mixture of skew-normal linear mixed models\nusing either an expectation–maximization (EM) type algorithm or\nits accelerated version (Damped Anderson Acceleration with\nEpsilon Monotonicity, DAAREM), including some possibilities for\nmodeling the within-subject dependence. Details can be found in\nSchumacher, Lachos and Matos (2021) <doi:10.1002/sim.8870>.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "URL": "https://github.com/fernandalschumacher/skewlmm",
  "BugReports": "https://github.com/fernandalschumacher/skewlmm/issues",
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  "Repository": "https://fernandalschumacher.r-universe.dev",
  "Date/Publication": "2025-01-20 01:26:35 UTC",
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  "Packaged": {
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  "Author": "Fernanda L. Schumacher [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-5724-8918>),\nLarissa A. Matos [aut] (ORCID: <https://orcid.org/0000-0002-2635-0901>),\nVictor H. Lachos [aut] (ORCID: <https://orcid.org/0000-0002-7239-2459>),\nKatherine A. L. Valeriano [aut] (ORCID:\n<https://orcid.org/0000-0001-6388-4753>),\nNicholas Henderson [ctb],\nRavi Varadhan [ctb]",
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    "sigma",
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      "title": "Data set for clinical trial measuring mice weight",
      "object": "miceweight",
      "class": [
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      ],
      "fields": [
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        "mouseID",
        "week",
        "weight"
      ],
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      "table": true,
      "tojson": true
    },
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      "object": "UTIdata",
      "class": [
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      ],
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        "Fup",
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        "RNAcens"
      ],
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      "table": true,
      "tojson": true
    }
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    {
      "page": "acfresid",
      "title": "Autocorrelation function for smn.lmm or smsn.lmm residuals",
      "topics": [
        "acfresid"
      ]
    },
    {
      "page": "boot_ci",
      "title": "Extract confidence intervals from 'lmmBoot' object",
      "topics": [
        "boot_ci"
      ]
    },
    {
      "page": "boot_par",
      "title": "Parametric bootstrap for SMSN/SMN objects",
      "topics": [
        "boot_par"
      ]
    },
    {
      "page": "coef",
      "title": "Extract coefficients from smsn.lmm, smn.lmm and smn.clmm objects",
      "topics": [
        "coef",
        "coef.SMN",
        "coef.SMNclmm",
        "coef.SMSN"
      ]
    },
    {
      "page": "confint",
      "title": "Computes confidence intervals from smn.lmm and smsn.lmm fitted models",
      "topics": [
        "confint",
        "confint.SMN",
        "confint.SMSN"
      ]
    },
    {
      "page": "criteria",
      "title": "Extracts criteria for model comparison of SMSN/SMN/SMNclmm objects",
      "topics": [
        "criteria"
      ]
    },
    {
      "page": "errorVar",
      "title": "Error scale matrix associated with 'times'",
      "topics": [
        "errorVar"
      ]
    },
    {
      "page": "fitted.SMN",
      "title": "Extract smn.lmm fitted values",
      "topics": [
        "fitted.SMN"
      ]
    },
    {
      "page": "fitted.SMNCens",
      "title": "Extract smn.clmm fitted values",
      "topics": [
        "fitted.SMNclmm"
      ]
    },
    {
      "page": "fitted.SMSN",
      "title": "Extract smsn.lmm fitted values",
      "topics": [
        "fitted.SMSN"
      ]
    },
    {
      "page": "fixef",
      "title": "Extract estimated fixed effects from smsn.lmm, smn.lmm and smn.clmm objects",
      "topics": [
        "fixef",
        "fixef.SMN",
        "fixef.SMSN"
      ]
    },
    {
      "page": "formula",
      "title": "Formula from an smn.lmm and smsn.lmm models",
      "topics": [
        "formula",
        "formula.SMN",
        "formula.SMSN"
      ]
    },
    {
      "page": "healy.plot",
      "title": "Healy-type plot from a smn.lmm or smsn.lmm object",
      "topics": [
        "healy.plot"
      ]
    },
    {
      "page": "lmmControl",
      "title": "Control options for 'smsn.lmm()', 'smn.lmm()' and 'smn.clmm()'",
      "topics": [
        "lmmControl"
      ]
    },
    {
      "page": "logLik",
      "title": "Log-likelihood of an smn.lmm and smsn.lmm models",
      "topics": [
        "logLik.SMN",
        "logLik.SMSN"
      ]
    },
    {
      "page": "lr.test",
      "title": "Likelihood-ratio test for SMSN/SMN objects",
      "topics": [
        "lr.test"
      ]
    },
    {
      "page": "mahalDist",
      "title": "Mahalanobis distance from a smn.lmm or smsn.lmm object",
      "topics": [
        "mahalDist"
      ]
    },
    {
      "page": "mahalDist.SMNCens",
      "title": "Mahalanobis distance from a smn.clmm object",
      "topics": [
        "mahalDistCens"
      ]
    },
    {
      "page": "miceweight",
      "title": "Data set for clinical trial measuring mice weight",
      "topics": [
        "miceweight"
      ]
    },
    {
      "page": "nobs",
      "title": "Extract the number of observations from smn.lmm and smsn.lmm fitted models",
      "topics": [
        "nobs",
        "nobs.SMN",
        "nobs.SMSN"
      ]
    },
    {
      "page": "plot",
      "title": "Plot a smn.lmm or smsn.lmm object",
      "topics": [
        "plot.SMN",
        "plot.SMSN"
      ]
    },
    {
      "page": "plot.acfresid",
      "title": "Plot ACF for smn.lmm or smsn.lmm residuals",
      "topics": [
        "plot.acfresid"
      ]
    },
    {
      "page": "plot.mahalDist",
      "title": "Plot Mahalanobis distance for a fitted smn.lmm or smsn.lmm",
      "topics": [
        "plot.mahalDist"
      ]
    },
    {
      "page": "plot.mahalDist.SMNCens",
      "title": "Plot Mahalanobis distance for a fitted smn.clmm",
      "topics": [
        "plot.mahalDistCens"
      ]
    },
    {
      "page": "plot.SMNCens",
      "title": "Plot a smn.clmm object",
      "topics": [
        "plot.SMNclmm"
      ]
    },
    {
      "page": "predict.SMN",
      "title": "Prediction of future observations from an smn.lmm object",
      "topics": [
        "predict.SMN"
      ]
    },
    {
      "page": "predict.SMNCens",
      "title": "Prediction of future observations from an smn.clmm object",
      "topics": [
        "predict.SMNclmm"
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    },
    {
      "page": "predict.SMSN",
      "title": "Prediction of future observations from an smsn.lmm object",
      "topics": [
        "predict.SMSN"
      ]
    },
    {
      "page": "print.SMN",
      "title": "Print a smn.lmm object",
      "topics": [
        "print.SMN"
      ]
    },
    {
      "page": "print.SMNCens",
      "title": "Print a smn.clmm object",
      "topics": [
        "print.SMNclmm"
      ]
    },
    {
      "page": "print.SMSN",
      "title": "Print a smsn.lmm object",
      "topics": [
        "print.SMSN"
      ]
    },
    {
      "page": "ranef",
      "title": "Extract random effects from smsn.lmm, smn.lmm and smn.clmm objects",
      "topics": [
        "ranef",
        "ranef.SMN",
        "ranef.SMNclmm",
        "ranef.SMSN"
      ]
    },
    {
      "page": "residuals",
      "title": "Extract model residuals from smn.lmm and smsn.lmm objects",
      "topics": [
        "residuals.SMN",
        "residuals.SMSN"
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    },
    {
      "page": "residuals.SMNCens",
      "title": "Extract model residuals from smn.clmm objects",
      "topics": [
        "residuals.SMNclmm"
      ]
    },
    {
      "page": "rsmsn.clmm",
      "title": "Generate data from SMSN-CLMM with censored responses",
      "topics": [
        "rsmsn.clmm"
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    },
    {
      "page": "rsmsn.lmm",
      "title": "Generate data from SMSN-LMM",
      "topics": [
        "rsmsn.lmm"
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    },
    {
      "page": "sigma",
      "title": "Residual standard deviation from smn.lmm and smsn.lmm objects",
      "topics": [
        "sigma",
        "sigma.SMN",
        "sigma.SMSN"
      ]
    },
    {
      "page": "smn.clmm",
      "title": "ML estimation of scale mixture of normal linear mixed models with censored responses",
      "topics": [
        "smn.clmm"
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      "page": "smn.lmm",
      "title": "ML estimation of scale mixture of normal linear mixed models",
      "topics": [
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      "page": "summary.SMN",
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      "page": "summary.SMNCens",
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      "page": "summary.SMSN",
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      "topics": [
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      "page": "update",
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      "page": "UTIdata",
      "title": "Data set for Unstructured Treatment Interruption Study",
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      "page": "weight_plot",
      "title": "Weight plot for smn.lmm or smsn.lmm object",
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